Data
The raw data for the analysis were from functional annountation of (livestock)
animal genomes (FAANG) by community members submitted to public databases
(NCBI and Ensembl).
The analysis of the data are carried out with our RNA quantification pipeline, and the end results can be downloaded ( via a user request, below ) or visulized as bar braphs with our in-house Expression Atalas tools.
Data description
- Data sets
Data set Species Data file Data counts Date received Processed by Genes Tissues Expressions 1 cattle E-MTAB-11699_Ensembl_mRNAseq_gene_TPM.txt.gz 18,813 51 2,917,890 2022-11-08 Bruna Petry 2 cattle E-MTAB-11699_02NCBI_mRNAseq_gene_TPM.txt.gz 16,292 51 3,718,250 2023-03-14 Bruna Petry 3 cattle PRJEB35127_Ensembl_mRNAseq_gene_TPM.txt.gz 18,813 29 41,886,720 2023-03-23 Bruna Petry 4 cattle PRJEB35127_02NCBI_mRNAseq_gene_TPM.txt.gz 16,292 29 53,376,000 2023-03-23 Bruna Petry - Data types
- Data analysis
- Data summary
- Data sets
Data sharing
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Data requests
- Write to EpiDB Team using the link at the bottom of this page.
* All data use at the EpiDB follow the FAANG data sharing statement.